Drug Discovery · Molecular Pharmacology · Oncology & Immunology

RezaBeheshti Zavareh

Ph.D., Medical Biophysics · University of Toronto

A drug discovery leader and molecular pharmacologist with 20+ years advancing small-molecule therapeutics from target validation through candidate nomination — building discovery biology functions, screening platforms, and the teams that run them.

Principal Scientist, Early Discovery Biology — Montai Therapeutics, Cambridge MACurrent
Associate Director — Trotana Therapeutics, San Diego
Senior Scientist — Ferring Research Institute, San Diego
Scientist — Janssen / Johnson & Johnson, San Diego
Fellow — Calibr / The Scripps Research Institute, La Jolla
Career at a glance
20+Years in Discovery
24Publications
1,461Citations
3Therapeutic Areas
Career Institutions
Montai Therapeutics · Cambridge, MA
Trotana Therapeutics · San Diego, CA
Janssen / Johnson & Johnson · San Diego, CA
Calibr / The Scripps Research Institute · La Jolla, CA
Ferring Research Institute · San Diego, CA
Princess Margaret Cancer Centre · Toronto, Canada
Leadership Profile

A Drug Discovery Leader Built Across Academia, Biotech, and Pharma

Dr. Reza Beheshti Zavareh is a molecular pharmacologist and drug discovery leader with more than twenty years of experience spanning academic research, biotechnology, and pharmaceutical organizations. His work has centered on advancing small-molecule therapeutics from target validation through lead optimization and candidate nomination, with deep expertise in screening cascade design, mechanistic characterization, and the disease-relevant cellular models that guide compound progression and portfolio decisions.

His career spans Princess Margaret Cancer Centre, Calibr and The Scripps Research Institute, Janssen Pharmaceutical Companies of Johnson & Johnson, Ferring Research Institute, Trotana Therapeutics, and currently Montai Therapeutics — a trajectory that has given him a working fluency in how discovery science operates differently across academic institutes, global pharma, and venture-backed biotech, and what it takes to translate strategy into execution in each setting.

He has built and led multidisciplinary discovery biology teams, designed and scaled high-throughput and high-content screening platforms, and partnered consistently with medicinal chemistry, computational sciences, DMPK, and translational biology to accelerate design-make-test cycles. He continues to lead from the bench while shaping scientific strategy and organizational priorities — a combination increasingly rare at the seniority his roles have reached.

Leadership & Organization Building

Building Discovery Capability, Not Inheriting It

At Trotana Therapeutics, Dr. Beheshti Zavareh built the discovery biology and molecular pharmacology function from the ground up as Associate Director — establishing the strategy, infrastructure, and operating model for small-molecule programs spanning RNA biology, oncology, and immunology. He directed multiple discovery programs from target validation through candidate nomination, defining the stage-gate criteria and pharmacology packages that governed progression decisions, and recruited and managed a multidisciplinary team of five scientists and associates.

That mandate extended beyond science. He presented program strategy and key decisions directly to executive leadership and the Board, contributing to portfolio prioritization at the organizational level. He served as site Safety Officer, building a safety-first laboratory culture through training, BSL-2 compliance oversight, and risk assessment. And he provided structured coaching and career development to scientists and research associates across multiple concurrent programs — developing them, in his words, into independent project leaders rather than long-term direct reports.

At Janssen, the mandate was different but the pattern was the same: establish capability that did not yet exist. He built and scaled high-throughput flow cytometry as a discovery platform supporting hit identification, lead optimization, mechanism-of-action studies, and translational pharmacology across immunology, neuroscience, infectious disease, and virology — then trained and managed the scientists and research associates who would run it after he moved on.

"I continue to lead from the bench while guiding scientific strategy and organizational priorities. The platforms and teams I have built are designed to outlast my own involvement in them."
Scientific Breadth

Fluent Across the Full Discovery Continuum

Few scientists at the director level remain genuinely hands-on across the full span of modern drug discovery: target-based and phenotypic screening, high-throughput biochemical assays, high-content imaging, high-throughput flow cytometry, biophysical characterization, translational pharmacology, and now AI-enabled discovery. Dr. Beheshti Zavareh has operated at depth in each of these domains rather than delegating them — a breadth that shapes how he designs screening cascades and where he places disease-relevant complexity within them.

His core expertise includes assay design from target validation through candidate nomination, screening cascade architecture and stage-gate decision frameworks, hit identification and lead optimization, SAR support and compound profiling, and mechanism-of-action studies built on biophysical, biochemical, and cell-based platforms. In cancer biology and immuno-oncology, his work spans hematologic and solid tumor signaling, cancer metabolism and glycobiology, tumor microenvironment interactions, T-cell exhaustion, and immune checkpoint pathways including PD-1/PD-L1 and CTLA-4. In inflammation and translational immunology, his experience covers gastrointestinal, cutaneous, and B-cell-driven disease models, integrating histology, cytokine analysis, and translational phenotyping into program-level decisions.

This breadth is what allows him to design screening cascades that integrate biochemical, biophysical, high-throughput, and disease-relevant cellular assays into a single coherent decision framework — rather than treating each as an isolated technical exercise.

Selected Scientific Contributions

Publications Spanning Mechanism, Translation, and Therapeutic Impact

Dr. Beheshti Zavareh's publication record reflects the same continuum his career has spanned — from doctoral work establishing N-glycosylation as a functional regulator of cancer cell migration and metastasis (Cancer Research, 2008; PLoS One, 2012), through postdoctoral contributions at Calibr and Scripps on serine biosynthesis inhibition (PNAS, 2016) and a Cell Chemical Biology study demonstrating that HSP90 inhibition modulates immune checkpoint protein expression with direct relevance to checkpoint blockade combination strategies (2020).

More recent contributions include the identification of small-molecule inhibitors for the NK cell receptor NKG2D (PNAS, 2023) and a contribution to a 2024 Science publication on myeloid reprogramming via JAK inhibition to enhance checkpoint blockade therapy — work situated at the leading edge of immuno-oncology combination strategy. Across 24 publications and more than 1,460 citations, the throughline is consistent: mechanistic rigor applied to questions with direct therapeutic relevance.

Selected publications: Zak J. et al., "Myeloid reprogramming by JAK inhibition enhances checkpoint blockade therapy." Science, 2024 · Thompson A.A. et al., "Identification of small-molecule inhibitors for NKG2D." PNAS, 2023 · Beheshti Zavareh R. et al., "HSP90 inhibition enhances cancer immunotherapy by modulating surface expression of immune checkpoint proteins." Cell Chemical Biology, 2020

Current Focus

AI-Enabled Discovery at Montai Therapeutics

As Principal Scientist, Early Discovery Biology at Montai Therapeutics, Dr. Beheshti Zavareh leads biological and molecular pharmacology strategy for immunology discovery programs within a machine-learning-enabled platform, guiding target progression from validation through early in vivo evaluation. He defines the integrated assay cascades, biomarker strategies, and progression criteria that link in vitro pharmacology, SAR interpretation, and in vivo endpoints — and establishes disease-relevant primary-cell and patient-derived co-culture models to improve translational fidelity and compound prioritization.

A core part of the role is mentoring and training scientists in advanced flow cytometry, laboratory automation, and AI-enabled discovery workflows, and serving as the internal expert for flow-cytometry-based ligand and receptor binding, receptor occupancy, and functional assays — including SOP design, quality control, and CRO oversight. He partners directly with medicinal chemistry, computational, PK/PD, and data science teams to integrate mechanistic and modeling insight into program decisions and portfolio prioritization.

"The assay cascades that feed an AI-enabled discovery platform have to meet a different bar than conventional screening data. They need to be robust and minimally biased enough that a model can learn the biology, not the noise."

Curriculum Vitae

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Professional Experience
Apr 2025 — Present● Current
Principal Scientist, Early Discovery Biology
Montai Therapeutics · Cambridge, MA
Leads biological and molecular pharmacology strategy for immunology discovery programs within a machine-learning-enabled platform. Defines integrated assay cascades, biomarker strategies, and progression criteria linking in vitro pharmacology, SAR interpretation, and in vivo endpoints. Internal expert for flow-cytometry-based ligand/receptor binding, receptor occupancy, and functional assays.
Sep 2024 — Apr 2025
Independent Consultant / Visiting Scientist
Loma Linda University Cancer Center · Yatiri Bio · Chemotactics
Scientific leadership and translational support across academic and startup environments in oncology and immunology. Visiting Scientist in myelodysplastic syndromes; AI-enabled biomarker analytics at Yatiri Bio; chemokine/receptor signaling assay consulting at Chemotactics.
Nov 2021 — Sep 2024
Associate Director, Lead Discovery & Molecular Pharmacology
Trotana Therapeutics · San Diego, CA
Built and led discovery biology and molecular pharmacology function from inception. Directed multiple programs from target validation through candidate nomination in RNA biology, oncology, and immunology. Recruited and managed multidisciplinary team of 5 scientists; drove cross-functional alignment across biology, chemistry, DMPK, and computational teams.
Jan 2021 — Nov 2021
Senior Scientist, Lead Finding Platform & Technology
Ferring Research Institute · San Diego, CA
Led an inflammatory bowel disease discovery program. Built a discovery team of 3 direct reports supporting HTS and in vitro pharmacology for autoimmune targets.
Dec 2017 — Jan 2021
Scientist, Lead Discovery and Profiling
Janssen Pharmaceutical / Johnson & Johnson · San Diego, CA
Established and scaled high-throughput flow cytometry as a discovery platform across immunology, neuroscience, infectious disease, and virology. Developed miniaturized cell-based and biochemical assays compatible with automation and HTS workflows.
Oct 2012 — Dec 2017
Postdoctoral / Institute Fellow
Calibr / The Scripps Research Institute · La Jolla, CA
Translational research in oncology and immunology. Developed HTS biochemical and cellular assays for target validation, hit discovery, and mechanism-of-action studies. Contributed to publications in Cell Chemical Biology, PNAS, and Cell Reports.
Selected Publications · 24 total · 1,461 citations
2024
Myeloid reprogramming by JAK inhibition enhances checkpoint blockade therapy
Zak J. et al. (contributing author)
Science
2023
Identification of small-molecule inhibitors for NKG2D
Thompson A.A. et al., Beheshti Zavareh R. et al.
Proceedings of the National Academy of Sciences
2020
HSP90 inhibition enhances cancer immunotherapy by modulating surface expression of immune checkpoint proteins
Beheshti Zavareh R., Spangenberg S.H., Woods A., Martinez-Pena F., Lairson L.L.
Cell Chemical Biology
2019
Discovery of Small Molecules for the Reversal of T Cell Exhaustion
Marro B.S. et al., Beheshti Zavareh R. et al.
Cell Reports
2018
Biochemical characterization and mutational analysis of novel aspartate aminotransferase inhibitors
Holt M.C., Assar Z., Beheshti Zavareh R., Lin L., Anglin J. et al.
Biochemistry
2016
Identification of a small molecule inhibitor of 3-phosphoglycerate dehydrogenase to target serine biosynthesis in cancers
Mullarky E. et al., Beheshti Zavareh R. et al.
Proceedings of the National Academy of Sciences
2012
Suppression of N-glycan branching by GnTI knockdown inhibits cell migration and metastasis
Beheshti Zavareh R., Sukhai M.A., Hurren R., Gronda M. et al.
PLoS One
2008
Inhibition of the sodium/potassium ATPase impairs N-glycan expression and function
Beheshti Zavareh R., Lau K.S., Hurren R., Datti A. et al.
Cancer Research
Core Expertise
In Vitro Pharmacology & Drug Discovery
Assay Cascade DesignTarget ValidationHit IdentificationLead OptimizationCandidate NominationSAR SupportMechanism of ActionBiophysical AssaysCRO Management
Cancer Biology & Immuno-Oncology
Tumor MicroenvironmentPD-1/PD-L1 BiologyT-cell ExhaustionNK Cell BiologyCancer MetabolismGlycobiologyHematologic Malignancies
Platforms & Methods
High-Throughput Flow CytometryHigh-Content ImagingTR-FRETAlphaScreenFluorescence Polarization1536-Well HTSqHTSReceptor OccupancyAI/ML-Integrated Discovery
Bioanalytical & Data Infrastructure
R (Statistical Computing)Genedata ScreenerCDD VaultFlowJoAPI Data ConnectivitySPR / MST / DSF
Leadership
Team BuildingCross-functional AlignmentPortfolio StrategyMentorshipExecutive PresentationsStage-Gate Frameworks
Education
2005 — 2011
Ph.D., Medical Biophysics
University of Toronto · Princess Margaret Cancer Centre · Toronto, Canada
Thesis: "Investigation of the Role of the N-Glycosylation Pathway in Malignancy" — established N-glycosylation as a functional regulator of cancer cell migration, metastasis, and drug response.
2000 — 2004
B.Sc., Genes, Genetics and Biotechnology
University of Toronto · Toronto, Canada

Technical Writing

Articles on assay development, molecular pharmacology, and the craft of drug discovery — written for scientists who already know what an IC₅₀ is and want the reasoning behind the method, not just the method.

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First articles in preparation
Oncology · Immunology · HTS Methodology
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Molecular Pharmacology · In Preparation
What HSP90 Inhibitors Taught Us About Immune Checkpoints — and What We Still Don't Understand
The Cell Chemical Biology paper showed that HSP90 inhibition modulates PD-L1 and PD-L2 expression at clinically relevant concentrations. But the mechanism beneath the mechanism remains underexplored. A deep read of what the data did and didn't prove.
Reza Beheshti Zavareh·Coming 2025
Notify Me When Published →
HTS Methodology
High-Throughput Flow Cytometry Is Not Just Fast Flow Cytometry
Building a true HTS flow platform requires rethinking sample prep, QC, and data architecture from scratch. Here's what changes and why it matters.
In preparation
Coming Soon →
Immunology · T-Cell Biology
T-Cell Exhaustion: What It Actually Is, and Why Reversing It Is Harder Than It Sounds
The Cell Reports paper on small molecules reversing T-cell exhaustion raised as many questions as it answered. An honest account of what we know and what the field still needs.
In preparation
Coming Soon →
Selective Availability

Scientific Consulting

While fully engaged at Montai Therapeutics, I take on a small number of consulting engagements each year where the scientific challenge is genuinely interesting and the fit is right. My focus is on early discovery problems that require both strategic thinking and deep experimental knowledge.

Assay Strategy & Cascade Design
Designing screening cascades from target validation through candidate nomination, with appropriate biochemical, biophysical, and cell-based triage logic.
Molecular Pharmacology Advisory
Mechanism-of-action characterization, target engagement strategies, and pharmacodynamic biomarker selection for small-molecule programs.
HTS & Flow Cytometry Platform Build
Establishing or optimizing high-throughput biochemical, cellular, or flow cytometry platforms for early-stage biotech and academic screening centers.
Translational Immunology & Oncology
Disease-relevant model selection, immune assay design, and alignment of in vitro pharmacology with in vivo translational endpoints.
Engagements considered on a selective basis · Typically 1–2 active projects at a time
Reach out at reza.beheshti@gmail.com with a brief description of the scientific challenge

Get in Touch

I'm reachable for scientific conversations, collaboration, consulting enquiries, peer review, and speaking invitations. I respond thoughtfully, though not always immediately.

Currently Open To
Collaboration,
Consulting & Science
  • Selective scientific consulting (see Consulting section)
  • Academic and startup research collaborations
  • Conference lectures and invited talks
  • Peer review (Cell Chem. Bio., PNAS, J. Med. Chem.)
  • Mentorship — postdocs and senior PhD students
  • Science communication and technical writing
Automation · HTS Flow Cytometry · High-Content Imaging · AI

The Technical Side

Twenty years of hands-on platform building — from a Biomek FX in a Toronto hematology lab to designing a first-of-its-kind high-throughput flow cytometry system at Janssen, and now integrating experimental biology with machine learning at Montai.

Research Philosophy

On Phenotypic vs. Target-Based Discovery — and Why the Question Is Wrong

Drug Discovery Cascade — HTS through In Vivo
The Discovery Cascade — throughput decreasing, biological complexity increasing

The most important decision in early drug discovery is not which compound to screen. It is which question to ask — and which biological system is capable of answering it honestly.

Phenotypic drug discovery and target-based drug discovery are not competing philosophies. They are complementary instruments, and the art lies in knowing when to reach for each. Target-based approaches offer mechanistic clarity, rational optimization, and throughput — but they assume the target is the right one, that an isolated biochemical system reflects the cell, and that the cell reflects the disease. Those assumptions fail more often than the field admits.

Phenotypic approaches test in complex biological systems, preserve whole-cell fidelity, and remain agnostic to mechanism — which is precisely their strength when the disease mechanism is incompletely understood, when the target is a pathway rather than a protein, or when the biology is multifactorial. Cancer, neurodegeneration, and complex immune dysregulation have historically yielded more first-in-class drugs through phenotypic routes than through target-based ones. That is not an accident.

But phenotypic screening is not simply "more biological." It demands more sophisticated assay design, more rigorous controls, and a clearer hypothesis about what the phenotype means mechanistically. An uninterpretable readout is not informative — it is noise at scale. The discipline is building cellular systems that are disease-relevant without being so complex they become uninterpretable, and that are scalable without sacrificing the biological fidelity that makes them worth running.

"The cascade is not a funnel for eliminating compounds. It is a series of progressively sharper biological questions. Each tier should increase mechanistic resolution — not merely confirm what the previous tier already showed."

The decision between phenotypic and target-based is therefore not ideological — it is contextual. It depends on what is known about the target, how well the disease mechanism is understood, what translational models exist, and at what stage of the program certainty about mechanism is needed. The answer is almost always a hybrid: use target-based methods to establish biochemical proof-of-concept and drive SAR efficiency, while incorporating disease-relevant cellular systems earlier than convention suggests — not as validation endpoints, but as decision-making tools that shape which compounds enter optimization in the first place. Strategically placing high-content phenotypic assays earlier in the cascade improves the quality of SAR decisions, increases confidence in mechanism, and aligns lead series with downstream pharmacodynamic and efficacy models before the program has sunk resources into the wrong series.

Chapter 01

Flow Cytometry — Every Platform, Every Application

Training in the University of Toronto's Department of Hematology instills a particular discipline. Clinical flow cytometry demands panel reproducibility at a standard wet-lab research cytometry rarely meets.

Two decades of cytometry breadth — from analytical benchtop instruments to high-throughput screening cytometers — have produced genuine expertise in platform selection, panel design, compensation and unmixing strategy, QC frameworks, and the translation of cytometry readouts into pharmacological conclusions. The right cytometer for a given biology is a scientific decision, not a procurement one.

A defining early experience was working with a pre-commercial version of the IQue Screener (Intellicyt/Sartorius) before it had a commercial name or established workflows. Building HT cytometry methods from scratch — before field standards existed — became a recurring theme, culminating in the Janssen HT-FC platform design.

"At Janssen we designed the entire HT-FC platform from scratch — instrument configuration, HRB robotic integration, plate workflow, staining automation, gating templates, and data pipeline — in collaboration with engineers, software teams, and instrument manufacturers. The most complex platform build of my career."
HT Cytometer
IQue Screener / iQue3
Intellicyt / Sartorius
Used pre-commercially. Built foundational HT-FC methods before field standards existed. The instrument that made cell-based screening at cytometric depth feasible.
Pre-Commercial
High-Parameter
FACSymphony A5 / LSRFortessa
BD Biosciences
Multi-laser high-parameter immunophenotyping. Extensive panel design and compensation experience across oncology and immunology programs.
Deep Expertise
Analytical / Sorting
FACSCanto II / FACSAria
BD Biosciences
Analytical and sorting workhorses. Extensive use from UofT hematology training onward through every career phase.
Deep Expertise
Spectral Cytometry
Aurora / Northern Lights
Cytek Biosciences
Full-spectrum unmixing removes compensation artifacts and enables very high panel density. Significantly expands multiparameter immune profiling capability.
Analytical
CytoFLEX S / Navios
Beckman Coulter
CytoFLEX for compact high-sensitivity work. Navios for clinical-adjacent multiparameter applications.
Benchtop
Attune NxT
Thermo Fisher Scientific
Acoustic focusing improves sensitivity at low cell numbers. Particularly useful for rare immune populations and primary patient samples.
Janssen HT-FC Platform — Designed 2018–2020 · HRB Integrated Workcell
Compound & Cell Preparation
Echo acoustic dispensing for compound transfer + Agilent Bravo for cell seeding and staining across 96/384-well formats with per-plate QC.
HRB Robotic Orchestration
HighRes Biosolutions modular workcell coordinating plate handling, incubation scheduling, and instrument routing across the integrated system.
HT Cytometry Acquisition
IQue-based acquisition — multiparameter flow readouts at screening throughput across target engagement, receptor occupancy, phenotyping, and functional assays.
Data Pipeline & Hit ID
Automated gating templates + activity scoring built cross-functionally with data science teams. SAR integration for medicinal chemistry. Multi-day campaign QC monitoring.
Chapter 02

High-Content Imaging & Phenotypic Screening

The instrument generates images. The science lives in deciding what to measure from them — a decision that cannot be undone after the experiment runs.

Experience spans the full arc of the field's development, from early ArrayScan campaigns at Calibr to confocal Opera Phenix workflows and morphological profiling with Cell Painting. The discipline is not operating the microscope; it's designing the assay before a single plate is imaged.

Cell Painting represents a philosophical shift in how imaging is used in drug discovery. Rather than asking "does compound X activate pathway Y?", it asks "what does compound X do to the cell — globally, without prior hypothesis?" Six-channel morphological profiling generates thousands of features per cell. Applied to mechanism-of-action studies, it reveals polypharmacology, toxicity signatures, and pathway engagement that target-focused assays miss entirely.

"Cell Painting doesn't tell you what a compound is doing. It tells you everything the compound is doing — and then the hard work of interpretation begins."
HCS System
ArrayScan VTI / XTI
Cellomics / Thermo Fisher
Workhorse of phenotypic HCS campaigns at Calibr/Scripps. Hit characterization, nuclear translocation, multi-parameter cellular response profiling.
Deep Expertise
Confocal HCS
Opera Phenix / Operetta CLS
PerkinElmer / Revvity
Spinning-disk confocal for high-resolution phenotypic screening. Superior Z-resolution for 3D cellular models and subcellular localization readouts.
Deep Expertise
HCS System
ImageXpress Micro Confocal
Molecular Devices
High-throughput widefield and confocal imaging with MetaXpress analysis. Applied in compound profiling and phenotypic screening campaigns.
Morphological Profiling
Cell Painting
Broad Institute / JUMP-CP Consortium
Six-channel unbiased morphological profiling. Applied for MOA classification, compound characterization, and phenotypic clustering in discovery programs.
Deep Expertise
Image Analysis
CellProfiler / CellPose
Broad Institute / Open Source
Open-source pipelines for cell segmentation, feature extraction, and morphological profiling. Core tools for Cell Painting workflows.
Kinetic Imaging
FLIPR Tetra
Molecular Devices
Fluorescent kinetic plate reader for calcium flux, GPCR signaling, and ion channel assays. Simultaneous 384-well imaging with real-time readout.
Chapter 03

Liquid Handling & Lab Automation

Most scientists encounter automation as something that already exists when they arrive. Reza has repeatedly been the person who built it.

~2004Beckman Coulter Biomek FX — first liquid handler, UofT Department of Hematology. Where automation instincts were formed.
2005–11Deepening fluency through doctoral work at Princess Margaret Cancer Centre.
2012–17Calibr / Scripps — GNF Systems dispensers, Labcyte Echo acoustic transfer, Agilent Bravo, full 1536-well HTS infrastructure.
2017–21Janssen — HighRes Biosolutions (HRB) integrated workcell; designed HT-FC platform from ground up.
OngoingSLAS participation and self-directed learning — tracking emerging automation and closed-loop experimentation platforms.

His first liquid handler was a Beckman Coulter Biomek FX — encountered in the University of Toronto's Department of Hematology. Learning a platform at that stage means internalizing something deeper than the protocol: how pipetting errors propagate, how dead volume behaves across tip types, how a CV of 3% in a 384-well plate means something entirely different from 3% in a 96-well plate.

At Calibr/Scripps, scale changed everything. The GNF Systems dispenser — purpose-built for 1536-well HTS — and the Labcyte Echo acoustic liquid handler together enabled compound dispensing at volumes previously impractical. The Agilent Bravo filled the gap for flexible cell-based workflows. At Janssen, the HighRes Biosolutions (HRB) modular robotic platform orchestrated multi-instrument integration — the backbone of the HT flow cytometry platform.

"The Echo changed compound dispensing the way PCR changed DNA amplification. Acoustic transfer eliminated tip contamination, DMSO carryover, and the small systematic errors that quietly corrupt dose-response data."
Self-Directed Development
I continue to explore and develop methods independently — tracking emerging platforms through SLAS, literature, and direct evaluation. Staying current with automation isn't institutional; it's a personal commitment.
Liquid Handler
Biomek FX
Beckman Coulter · ~2004
The original. UofT Hematology. Where the instinct for automation was built — before it was called a skill.
Origin Story
Liquid Handler
Biomek i5 / i7
Beckman Coulter · Later Generations
Evolved span arm design, improved throughput and multi-tip flexibility. Used across multiple sites.
Liquid Handler
Bravo / VPrep
Agilent (formerly Velocity11)
Flexible 96/384-well pipetting for complex cell-based and biochemical workflows. Calibr/Scripps and Janssen.
Deep Expertise
Acoustic Dispenser
Echo 550 / 650
Labcyte (now Beckman Coulter)
Contactless nanoliter acoustic transfer. Transformed compound management and eliminated tip-based carryover artifacts.
Deep Expertise
Robotic Integration
HRB Modular Workcell
HighRes Biosolutions
Modular robotic platform at Janssen orchestrating the HT-FC system — integrating liquid handlers, plate movers, readers, and cytometers into a single automated workflow.
Deep Expertise
Liquid Handler
STARlet / STAR
Hamilton Robotics
High-precision multi-channel liquid handling. Encountered across multiple discovery sites and CRO collaborations.
Chapter 04

Detection Platforms — Biochemical, Biophysical & Binding Readouts

The plate reader is the workhorse of biochemical HTS. Knowing which reader to reach for — and which detection mode fits the assay biology — is the difference between a clean Z′ and a noise floor.

HTS Reader
PHERAstar FSX
BMG Labtech
Gold standard for AlphaScreen, TR-FRET, and FP-based HTS biochemical assays. Fast 1536-well read times and excellent sensitivity-to-noise ratio.
Deep Expertise
Multimode Reader
EnVision
PerkinElmer / Revvity
Multimode detection for TR-FRET, AlphaScreen, luminescence, and absorbance. Standard in pharma HTS environments. Extensive use at Janssen and Calibr.
Deep Expertise
Multimode Reader
SpectraMax Paradigm / i3x
Molecular Devices
Flexible cartridge-based multimode reader. Applied in biochemical assay development and secondary screening workflows.
Biophysics · Working Knowledge
SPR — Surface Plasmon Resonance
Biacore / Cytiva
Working knowledge of binding kinetics, KD determination, and target engagement interpretation from SPR data. Experienced in directing and interpreting CRO and specialist team outputs; not a hands-on operator.
Strategic Oversight
Biophysics · Working Knowledge
MST — Microscale Thermophoresis
NanoTemper Monolith
Familiarity with MST for affinity measurement of small molecules and biologics in solution. Confident in experimental design, data interpretation, and integrating MST into cascade decision-making.
Strategic Oversight
Biophysics · Working Knowledge
DSF — Differential Scanning Fluorimetry
Various Platforms
Working knowledge of thermal shift assays for target engagement and compound binding confirmation. Used as orthogonal validation in hit progression cascades. Team management rather than direct operation.
Strategic Oversight
On Biophysical Methods
SPR, MST, and DSF are essential orthogonal tools in modern drug discovery cascades. My expertise is in knowing when to reach for each, how to design the experiment to answer the right question, and how to interpret the output in the context of the program — not in operating the instruments directly. I build and manage the teams who do.
Chapter 05

AI & Machine Learning — Across All Platforms

AI in biology is only as good as the experimental design that generated its training data. The scientist who built the platform is the one who can ensure the model has something real to learn from.

Engagement with AI/ML spans three distinct application layers, each requiring different expertise and each carrying specific failure modes when the underlying data is flawed.

"An automated gating algorithm trained on poorly compensated flow data will learn the artifact, not the biology. A morphological profiling model trained on inconsistent staining will cluster by plate rather than by compound. You cannot outsource experimental design to the algorithm."
High-Content Imaging
Deep Learning for Image Analysis
CNN-based cell segmentation, phenotype classification, and morphological feature extraction from Cell Painting and HCS datasets. Moving beyond rule-based analysis toward learned representations that capture what rules miss.
Flow Cytometry · In Development
Automated Gating & Population Discovery
ML-assisted gating for high-parameter panels and unsupervised population discovery in spectral and high-dimensional datasets — an area I am actively developing independently, self-taught and self-motivated, as a natural extension of two decades of cytometry expertise.
Drug Discovery Platform
AI-Enabled Biology (Montai)
Designing assay cascades that feed multimodal AI models with high-quality pharmacology data. Understanding how batch effects, assay variability, and biological noise corrupt training sets is now a core scientific competency.
Translational Analytics
Biomarker & Proteomics AI
AI-enabled proteomics-driven biomarker discovery in consulting context (Yatiri Bio). Pattern identification across complex multi-analyte clinical and translational datasets where human pattern recognition fails at scale.
Self-Directed Development
Much of this AI/ML integration work is self-inspired and self-taught — driven by the conviction that a biologist who understands machine learning well enough to collaborate effectively with data scientists is a fundamentally different kind of scientist. Building that fluency deliberately, one tool and one dataset at a time.
Chapter 06

Bioanalytical Software & Data Infrastructure

A screening cascade is only as trustworthy as the data infrastructure underneath it. Most discovery biologists treat data management as an afterthought delegated to informatics; this has been a core operating competency throughout my career.

Running HTS, HT-FC, and high-content campaigns at scale means generating data volumes that cannot be managed in spreadsheets. Fluency in statistical computing and the registration, analysis, and decision-support platforms that pharma and biotech organizations run on has been essential to translating raw plate data into defensible SAR and progression decisions — and to ensuring that data is connected and queryable across the organization rather than trapped in silos.

Statistical Computing
R
Statistical Analysis & Visualization
Used for HTS data analysis — dose-response curve fitting, plate-level QC and normalization, Z′ and SSMD calculation across campaigns, and custom visualization of multi-parameter screening datasets.
Deep Expertise
Registration & Decision Support
Genedata Screener
Genedata
HTS and dose-response data analysis, curve fitting, and assay cascade decision support across multiple discovery organizations. Core platform for translating raw plate reads into SAR-ready data.
Deep Expertise
Compound & Data Management
CDD Vault
Collaborative Drug Discovery
Compound registration, activity data management, and structure-activity tracking across discovery programs. Central system of record connecting biology data to medicinal chemistry decisions.
Deep Expertise
Cytometry Analysis
FlowJo
BD Biosciences
Standard platform for flow cytometry data analysis — gating strategy design, compensation, population statistics, and figure generation across two decades of cytometry work.
Deep Expertise
Data Connectivity
APIs & System Integration
Cross-Platform Connectivity
Working knowledge of API-based data connectivity between screening instruments, registration systems, and analysis platforms — ensuring data flows automatically rather than through manual transfer and re-entry.
Operating Philosophy
The Data Warrior Mindset
Personal Operating Principle
Data that cannot be queried, traced, or trusted is not an asset — it is a liability. Insisting on clean, connected, decision-ready data across every program has been a consistent, non-negotiable standard.
"I think of myself as a data warrior. The instrument generates a number; the job is making sure that number is clean, traceable, connected to the right compound and the right plate, and ready to drive a decision the moment someone needs it."